Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, merr family | SAMN05421854_101820 | Not Available | Positive | 810780 - 811118 | 12441.4 |
| recb family nuclease, putative, tm0106 family | SAMN05421854_101821 | Not Available | Negative | 811249 - 812883 | 60271.4 |
| hypothetical protein | SAMN05421854_101822 | Not Available | Positive | 813002 - 813481 | 16946.5 |
| osmoprotectant transport system substrate-binding protein | SAMN05421854_101823 | Not Available | Negative | 813547 - 814518 | 34881.1 |
| osmoprotectant transport system permease protein | SAMN05421854_101824 | Not Available | Negative | 814518 - 815297 | 27248.1 |
| osmoprotectant transport system atp-binding protein | SAMN05421854_101825 | Not Available | Negative | 815294 - 816484 | 43131.6 |
| osmoprotectant transport system permease protein | SAMN05421854_101826 | Not Available | Negative | 816477 - 817124 | 22383.2 |
| hypothetical protein | SAMN05421854_101827 | Not Available | Positive | 817405 - 817947 | 17956.6 |
| uncharacterized protein ycni | SAMN05421854_101828 | Not Available | Positive | 818050 - 818802 | 25667.3 |
| hypothetical protein | SAMN05421854_101829 | Not Available | Positive | 818802 - 819467 | 22207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
