Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05421854_101810 | Not Available | Negative | 801399 - 802244 | 32272.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_101811 | Not Available | Positive | 802348 - 803790 | 49204.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_101812 | Not Available | Positive | 803851 - 804357 | 19015.7 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421854_101813 | Not Available | Positive | 804350 - 805243 | 32314.8 |
| hypothetical protein | SAMN05421854_101814 | Not Available | Positive | 805296 - 805679 | 13733.1 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421854_101815 | Not Available | Negative | 805707 - 806117 | 15221.7 |
| udpglucose 6-dehydrogenase | SAMN05421854_101816 | Not Available | Negative | 806224 - 807531 | 45080.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_101817 | Not Available | Positive | 807705 - 808463 | 25802.1 |
| methyltransferase domain-containing protein | SAMN05421854_101818 | Not Available | Negative | 808517 - 809197 | 24799.6 |
| transcriptional regulator padr-like family protein | SAMN05421854_101819 | Not Available | Negative | 809352 - 809987 | 23940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
