Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101800 | Not Available | Negative | 788953 - 789444 | 17034.4 |
| hypothetical protein | SAMN05421854_101801 | Not Available | Positive | 789598 - 791082 | 50680.8 |
| hypothetical protein | SAMN05421854_101802 | Not Available | Positive | 791216 - 792394 | 41286.6 |
| methyltransferase, fkbm family | SAMN05421854_101803 | Not Available | Positive | 792387 - 796061 | 134690.0 |
| hypothetical protein | SAMN05421854_101804 | Not Available | Negative | 796083 - 797225 | 41172.8 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421854_101805 | Not Available | Positive | 797420 - 798970 | 57383.6 |
| two component transcriptional regulator, luxr family | SAMN05421854_101806 | Not Available | Negative | 799105 - 799773 | 24051.9 |
| signal transduction histidine kinase | SAMN05421854_101807 | Not Available | Negative | 799770 - 800891 | 39895.3 |
| hypothetical protein | SAMN05421854_101808 | Not Available | Positive | 801017 - 801244 | 7735.15 |
| hypothetical protein | SAMN05421854_101809 | Not Available | Positive | 801283 - 801462 | 6099.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
