Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | SAMN05421854_101790 | Not Available | Negative | 779099 - 779944 | 30093.1 |
| two-component system, lytt family, sensor kinase | SAMN05421854_101791 | Not Available | Negative | 779963 - 781267 | 47610.6 |
| formamidopyrimidine-dna glycosylase | SAMN05421854_101792 | Not Available | Negative | 781996 - 782856 | 30747.1 |
| protein of unknown function | SAMN05421854_101793 | Not Available | Negative | 782895 - 783335 | 16466.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421854_101794 | Not Available | Negative | 783405 - 785033 | 55960.8 |
| Trna-gly | Not Available | Not Available | Positive | 785245 - 785317 | Not Available |
| phospholipase c | SAMN05421854_101796 | Not Available | Positive | 785597 - 787060 | 52750.6 |
| immunity protein 7 | SAMN05421854_101797 | Not Available | Negative | 787095 - 787496 | 14619.2 |
| protein of unknown function | SAMN05421854_101798 | Not Available | Negative | 787523 - 788068 | 20964.4 |
| hypothetical protein | SAMN05421854_101799 | Not Available | Negative | 788256 - 788876 | 23353.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
