Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421854_101770 | Not Available | Positive | 761280 - 762080 | 29359.2 |
| ppox class probable f420-dependent enzyme | SAMN05421854_101771 | Not Available | Negative | 762097 - 762564 | 17320.6 |
| caax protease self-immunity | SAMN05421854_101772 | Not Available | Positive | 762587 - 763420 | 30218.4 |
| arginine deiminase | SAMN05421854_101773 | Not Available | Positive | 763446 - 764678 | 44022.5 |
| ferritin | SAMN05421854_101774 | Not Available | Positive | 764986 - 765543 | 20920.6 |
| dihydrofolate reductase | SAMN05421854_101775 | Not Available | Negative | 765613 - 766197 | 20703.7 |
| hypothetical protein | SAMN05421854_101776 | Not Available | Negative | 766293 - 767120 | 27677.3 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421854_101777 | Not Available | Negative | 767117 - 767773 | 23607.7 |
| uncharacterized conserved protein, duf952 family | SAMN05421854_101778 | Not Available | Negative | 767805 - 768158 | 12645.0 |
| hypothetical protein | SAMN05421854_101779 | Not Available | Negative | 768214 - 769089 | 31569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
