Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate kinase | SAMN05421854_101750 | Not Available | Positive | 738846 - 739781 | 35736.9 |
| hypothetical protein | SAMN05421854_101751 | Not Available | Positive | 739945 - 740094 | 5203.46 |
| hypothetical protein | SAMN05421854_101752 | Not Available | Positive | 740129 - 741682 | 56090.1 |
| hypothetical protein | SAMN05421854_101753 | Not Available | Negative | 741679 - 742500 | 29538.6 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05421854_101754 | Not Available | Positive | 742607 - 742927 | 12124.4 |
| dna polymerase-3 subunit epsilon | SAMN05421854_101755 | Not Available | Negative | 742916 - 744328 | 49471.8 |
| excalibur calcium-binding domain-containing protein | SAMN05421854_101756 | Not Available | Positive | 744532 - 745347 | 27898.6 |
| two component transcriptional regulator, luxr family | SAMN05421854_101757 | Not Available | Positive | 745409 - 746035 | 22628.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421854_101758 | Not Available | Negative | 746037 - 746993 | 34904.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_101759 | Not Available | Positive | 747053 - 748192 | 41379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
