Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase | SAMN05421854_101740 | Not Available | Negative | 730409 - 731575 | 44218.7 |
| hypothetical protein | SAMN05421854_101741 | Not Available | Negative | 731576 - 732196 | 21213.4 |
| septum formation | SAMN05421854_101742 | Not Available | Positive | 732327 - 733283 | 33240.6 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN05421854_101743 | Not Available | Positive | 733287 - 733637 | 13007.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_101744 | Not Available | Positive | 733791 - 735032 | 42976.0 |
| hypothetical protein | SAMN05421854_101745 | Not Available | Positive | 735089 - 735547 | 15623.4 |
| protein of unknown function | SAMN05421854_101746 | Not Available | Negative | 735569 - 736234 | 21585.4 |
| probable phosphoglycerate mutase | SAMN05421854_101747 | Not Available | Negative | 736385 - 737002 | 22104.1 |
| prephenate dehydratase | SAMN05421854_101748 | Not Available | Negative | 737085 - 738029 | 33270.3 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05421854_101749 | Not Available | Positive | 738164 - 738712 | 18781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
