Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN05421854_101730 | Not Available | Negative | 717979 - 718908 | 33965.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421854_101731 | Not Available | Negative | 718935 - 720065 | 40386.9 |
| predicted atpase | SAMN05421854_101732 | Not Available | Positive | 720198 - 723275 | 109751.0 |
| l-2-hydroxyglutarate oxidase | SAMN05421854_101733 | Not Available | Positive | 723352 - 724521 | 41860.1 |
| protein of unknown function | SAMN05421854_101734 | Not Available | Negative | 724559 - 725560 | 34795.8 |
| hypothetical protein | SAMN05421854_101735 | Not Available | Negative | 725638 - 725958 | 11132.7 |
| seryl-trna synthetase | SAMN05421854_101736 | Not Available | Negative | 726046 - 727314 | 46642.1 |
| 4-aminobutyrate aminotransferase | SAMN05421854_101737 | Not Available | Positive | 727467 - 728747 | 45894.9 |
| haloalkane dehalogenase | SAMN05421854_101738 | Not Available | Negative | 728950 - 729855 | 32434.5 |
| protein of unknown function | SAMN05421854_101739 | Not Available | Negative | 729902 - 730354 | 15336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
