Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421854_101720 | Not Available | Negative | 710484 - 711215 | 24203.2 |
| acyl carrier protein | SAMN05421854_101721 | Not Available | Negative | 711208 - 711453 | 9154.68 |
| udp-n-acetylglucosamine acyltransferase | SAMN05421854_101722 | Not Available | Negative | 711463 - 712206 | 25993.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421854_101723 | Not Available | Positive | 712398 - 713504 | 39406.1 |
| predicted dehydrogenase | SAMN05421854_101724 | Not Available | Positive | 713501 - 714454 | 34729.7 |
| hypothetical protein | SAMN05421854_101725 | Not Available | Negative | 714455 - 715189 | 26182.3 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421854_101726 | Not Available | Negative | 715186 - 715686 | 18681.1 |
| hypothetical protein | SAMN05421854_101727 | Not Available | Negative | 715812 - 715973 | 5970.18 |
| transferase hexapeptide (six repeat-containing protein) | SAMN05421854_101728 | Not Available | Negative | 716107 - 716724 | 22486.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421854_101729 | Not Available | Negative | 716724 - 717908 | 43452.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
