Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101710 | Not Available | Positive | 696348 - 698270 | 68678.1 |
| hypothetical protein | SAMN05421854_101711 | Not Available | Negative | 698290 - 698709 | 15117.9 |
| hypothetical protein | SAMN05421854_101712 | Not Available | Negative | 698702 - 699178 | 17704.3 |
| short repeat-containing protein of unknown function | SAMN05421854_101713 | Not Available | Negative | 699310 - 703275 | 136009.0 |
| hypothetical protein | SAMN05421854_101714 | Not Available | Positive | 703540 - 704073 | 18223.5 |
| trypsin | SAMN05421854_101715 | Not Available | Positive | 704121 - 705464 | 47087.9 |
| hypothetical protein | SAMN05421854_101716 | Not Available | Negative | 705728 - 706741 | 35238.6 |
| acyl-coa reductase (luxc) | SAMN05421854_101717 | Not Available | Negative | 706756 - 708000 | 44222.3 |
| acyl-protein synthetase, luxe | SAMN05421854_101718 | Not Available | Negative | 707997 - 709049 | 38557.0 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421854_101719 | Not Available | Negative | 709046 - 710455 | 49637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
