Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421854_101690 | Not Available | Negative | 678324 - 678791 | 16807.6 |
| decaprenylphospho-beta-d-ribofuranose 2-oxidase | SAMN05421854_101691 | Not Available | Positive | 678919 - 680310 | 50628.4 |
| decaprenylphospho-beta-d-erythro-pentofuranosid- 2-ulose 2-reductase | SAMN05421854_101692 | Not Available | Positive | 680307 - 681062 | 26622.2 |
| hypothetical protein | SAMN05421854_101693 | Not Available | Positive | 681155 - 681805 | 23429.0 |
| helix-turn-helix | SAMN05421854_101694 | Not Available | Negative | 681802 - 682119 | 11430.9 |
| hypothetical protein | SAMN05421854_101695 | Not Available | Positive | 682233 - 682631 | 14255.9 |
| protein of unknown function | SAMN05421854_101696 | Not Available | Positive | 682628 - 683242 | 21120.2 |
| hypothetical protein | SAMN05421854_101697 | Not Available | Positive | 683244 - 684485 | 41750.8 |
| espg family protein | SAMN05421854_101698 | Not Available | Positive | 684482 - 685192 | 25536.4 |
| dna-binding transcriptional regulator, merr family | SAMN05421854_101699 | Not Available | Negative | 685193 - 685561 | 13630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
