Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05421854_101680 | Not Available | Positive | 669742 - 670557 | 29819.2 |
| rhamnopyranosyl-n-acetylglucosaminyl-diphospho- decaprenol beta-1,3/1,4-galactofuranosyltransferase | SAMN05421854_101681 | Not Available | Positive | 670554 - 671465 | 33783.8 |
| hypothetical protein | SAMN05421854_101682 | Not Available | Positive | 671735 - 672250 | 19056.5 |
| hypothetical protein | SAMN05421854_101683 | Not Available | Negative | 672308 - 673486 | 38916.5 |
| hypothetical protein | SAMN05421854_101684 | Not Available | Negative | 673483 - 673902 | 14391.8 |
| espg family protein | SAMN05421854_101685 | Not Available | Negative | 673935 - 674702 | 27462.8 |
| hypothetical protein | SAMN05421854_101686 | Not Available | Positive | 674884 - 675018 | 4881.65 |
| hypothetical protein | SAMN05421854_101687 | Not Available | Positive | 675097 - 675339 | 8394.03 |
| acyl-coa dehydrogenase | SAMN05421854_101688 | Not Available | Negative | 675336 - 676334 | 34785.5 |
| galactofuranosylgalactofuranosylrhamnosyl-n- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase | SAMN05421854_101689 | Not Available | Negative | 676411 - 678318 | 70462.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
