Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ktsc domain-containing protein | SAMN05421854_101670 | Not Available | Negative | 660927 - 661139 | 7998.62 |
| Trna-ser | Not Available | Not Available | Positive | 661231 - 661315 | Not Available |
| dna-binding transcriptional regulator, marr family | SAMN05421854_101672 | Not Available | Negative | 661318 - 661809 | 18365.8 |
| hypothetical protein | SAMN05421854_101673 | Not Available | Positive | 662322 - 663254 | 32619.6 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05421854_101674 | Not Available | Positive | 663275 - 664252 | 33705.7 |
| cysteine desulfurase family protein, vc1184 subfamily | SAMN05421854_101675 | Not Available | Negative | 664304 - 665503 | 41672.1 |
| protein of unknown function | SAMN05421854_101676 | Not Available | Positive | 665613 - 666182 | 20149.7 |
| epoxide hydrolase | SAMN05421854_101677 | Not Available | Negative | 666179 - 667324 | 42144.5 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN05421854_101678 | Not Available | Negative | 667405 - 668670 | 45957.7 |
| abc-2 type transport system permease protein | SAMN05421854_101679 | Not Available | Positive | 668785 - 669738 | 35217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
