Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | SAMN05421854_101660 | Not Available | Negative | 652507 - 653385 | 32205.6 |
| nitt/taut family transport system atp-binding protein | SAMN05421854_101661 | Not Available | Negative | 653375 - 654178 | 28904.9 |
| two-component system, citb family, sensor kinase | SAMN05421854_101662 | Not Available | Positive | 654324 - 655955 | 58240.7 |
| two-component system, citb family, response regulator | SAMN05421854_101663 | Not Available | Positive | 655952 - 656608 | 23549.0 |
| hypothetical protein | SAMN05421854_101664 | Not Available | Negative | 656669 - 657325 | 23025.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421854_101665 | Not Available | Negative | 657447 - 658283 | 29253.0 |
| v8-like glu-specific endopeptidase | SAMN05421854_101666 | Not Available | Positive | 658350 - 659099 | 25862.7 |
| ribosome-associated protein | SAMN05421854_101667 | Not Available | Positive | 659101 - 659334 | 8460.02 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05421854_101668 | Not Available | Negative | 659603 - 660412 | 27916.7 |
| hypothetical protein | SAMN05421854_101669 | Not Available | Positive | 660637 - 660918 | 10317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
