Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421854_101610 | Not Available | Negative | 609984 - 611432 | 50417.8 |
| mfs transporter, putative metabolite:h+ symporter | SAMN05421854_101611 | Not Available | Negative | 611432 - 612826 | 48976.4 |
| predicted transcriptional regulator, contains hth domain | SAMN05421854_101612 | Not Available | Positive | 613415 - 614911 | 55956.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421854_101613 | Not Available | Negative | 615549 - 616205 | 23114.4 |
| regulatory protein, gntr family | SAMN05421854_101614 | Not Available | Negative | 616202 - 617047 | 31413.3 |
| hypothetical protein | SAMN05421854_101615 | Not Available | Positive | 617186 - 617539 | 12666.0 |
| hypothetical protein | SAMN05421854_101616 | Not Available | Positive | 617819 - 618046 | 8020.37 |
| hypothetical protein | SAMN05421854_101617 | Not Available | Positive | 618199 - 618360 | 5447.01 |
| hypothetical protein | SAMN05421854_101618 | Not Available | Positive | 618367 - 618768 | 14583.2 |
| hypothetical protein | SAMN05421854_101619 | Not Available | Positive | 618768 - 619040 | 10004.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
