Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05421854_101590 | Not Available | Negative | 591545 - 591850 | 11634.8 |
| serine/threonine-protein kinase rsbw | SAMN05421854_101591 | Not Available | Positive | 592000 - 592416 | 15096.9 |
| rna polymerase sigma-b factor | SAMN05421854_101592 | Not Available | Positive | 592413 - 593189 | 28778.4 |
| histidine kinase-like atpase domain-containing protein | SAMN05421854_101593 | Not Available | Positive | 593254 - 593673 | 14979.9 |
| hypothetical protein | SAMN05421854_101594 | Not Available | Negative | 593619 - 594143 | 18510.2 |
| regulatory protein, luxr family | SAMN05421854_101595 | Not Available | Positive | 594267 - 595268 | 36178.3 |
| serine protease, subtilisin family | SAMN05421854_101596 | Not Available | Negative | 595298 - 598873 | 126500.0 |
| protein of unknown function | SAMN05421854_101597 | Not Available | Negative | 599324 - 599977 | 24322.7 |
| hypothetical protein | SAMN05421854_101598 | Not Available | Positive | 600220 - 601257 | 37465.6 |
| hypothetical protein | SAMN05421854_101599 | Not Available | Positive | 601294 - 602220 | 34323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
