Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase / dehydrase and lipid transport | SAMN05421854_101570 | Not Available | Positive | 572540 - 572986 | 16377.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421854_101571 | Not Available | Positive | 573071 - 573829 | 27300.7 |
| chat domain-containing protein | SAMN05421854_101572 | Not Available | Negative | 573962 - 576550 | 93022.3 |
| hypothetical protein | SAMN05421854_101573 | Not Available | Negative | 576604 - 577089 | 17514.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421854_101574 | Not Available | Negative | 577086 - 577691 | 22296.7 |
| hypothetical protein | SAMN05421854_101575 | Not Available | Negative | 579115 - 579255 | 4878.58 |
| lysophospholipase l1 | SAMN05421854_101576 | Not Available | Negative | 579355 - 580104 | 26424.6 |
| nad(p)h-binding | SAMN05421854_101577 | Not Available | Negative | 580677 - 581306 | 22381.2 |
| transcriptional regulator, tetr family | SAMN05421854_101578 | Not Available | Positive | 581395 - 581958 | 20205.1 |
| marr family protein | SAMN05421854_101579 | Not Available | Negative | 581955 - 582440 | 18504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
