Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groes | SAMN05421854_10121 | Not Available | Negative | 19823 - 20152 | 11610.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421854_10122 | Not Available | Positive | 20453 - 22366 | 68557.6 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421854_10123 | Not Available | Negative | 22399 - 23784 | 51636.4 |
| exosortase/archaeosortase family protein | SAMN05421854_10124 | Not Available | Negative | 23781 - 24338 | 19804.8 |
| hypothetical protein | SAMN05421854_10125 | Not Available | Positive | 24665 - 25432 | 24730.0 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN05421854_10126 | Not Available | Positive | 25453 - 25632 | 5966.47 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05421854_10127 | Not Available | Positive | 25651 - 26865 | 42172.9 |
| n6-l-threonylcarbamoyladenine synthase | SAMN05421854_10128 | Not Available | Negative | 26846 - 27892 | 35659.7 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421854_10129 | Not Available | Negative | 27892 - 28374 | 17495.6 |
| trna threonylcarbamoyl adenosine modification protein yeaz | SAMN05421854_10130 | Not Available | Negative | 28371 - 29036 | 23151.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
