Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle receptor subunit beta, a gtpase | SAMN05421854_101550 | Not Available | Positive | 551760 - 552347 | 21098.4 |
| tryptophanase | SAMN05421854_101551 | Not Available | Negative | 552429 - 553802 | 48976.3 |
| aromatic prenyltransferase, dmats type | SAMN05421854_101552 | Not Available | Negative | 553848 - 554924 | 39107.5 |
| protein of unknown function | SAMN05421854_101553 | Not Available | Positive | 555277 - 555816 | 19994.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05421854_101554 | Not Available | Positive | 556629 - 557996 | 47349.5 |
| protein of unknown function | SAMN05421854_101555 | Not Available | Negative | 558180 - 558710 | 18575.9 |
| uncharacterized membrane protein | SAMN05421854_101556 | Not Available | Negative | 558875 - 559321 | 16062.1 |
| transcriptional regulator, tetr family | SAMN05421854_101557 | Not Available | Positive | 559412 - 559990 | 21217.3 |
| hypothetical protein | SAMN05421854_101558 | Not Available | Positive | 560110 - 560994 | 31401.3 |
| putative esterase | SAMN05421854_101559 | Not Available | Negative | 560998 - 562215 | 43774.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
