Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101540 | Not Available | Negative | 541692 - 541994 | 10655.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05421854_101541 | Not Available | Positive | 542262 - 543308 | 37968.4 |
| uncharacterized conserved protein, duf427 family | SAMN05421854_101542 | Not Available | Negative | 543427 - 543792 | 13241.6 |
| trypsin | SAMN05421854_101543 | Not Available | Negative | 543875 - 544588 | 24139.3 |
| hypothetical protein | SAMN05421854_101544 | Not Available | Negative | 544747 - 545148 | 14356.8 |
| hypothetical protein | SAMN05421854_101545 | Not Available | Negative | 545132 - 545497 | 12368.7 |
| hypothetical protein | SAMN05421854_101546 | Not Available | Positive | 545816 - 548200 | 86993.3 |
| signal transduction histidine kinase | SAMN05421854_101547 | Not Available | Positive | 548589 - 550949 | 84698.2 |
| predicted regulator of ras-like gtpase activity, roadblock/lc7/mglb family | SAMN05421854_101548 | Not Available | Positive | 550992 - 551417 | 15037.0 |
| protein of unknown function | SAMN05421854_101549 | Not Available | Positive | 551414 - 551779 | 13131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
