Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421854_101520 | Not Available | Positive | 523087 - 524232 | 40800.5 |
| hypothetical protein | SAMN05421854_101521 | Not Available | Positive | 524241 - 524705 | 17371.8 |
| short-chain dehydrogenase | SAMN05421854_101522 | Not Available | Negative | 524676 - 525515 | 29025.9 |
| nte family protein | SAMN05421854_101523 | Not Available | Negative | 525512 - 526444 | 32403.2 |
| diguanylate cyclase, ggdef domain | SAMN05421854_101524 | Not Available | Negative | 526515 - 526763 | 8526.15 |
| hypothetical protein | SAMN05421854_101525 | Not Available | Positive | 527273 - 527392 | 4186.01 |
| dna-binding transcriptional regulator, lysr family | SAMN05421854_101526 | Not Available | Negative | 527682 - 528575 | 31164.6 |
| hypothetical protein | SAMN05421854_101527 | Not Available | Positive | 528700 - 529689 | 34956.6 |
| hypothetical protein | SAMN05421854_101528 | Not Available | Negative | 529732 - 530136 | 15361.6 |
| hypothetical protein | SAMN05421854_101529 | Not Available | Negative | 530146 - 533511 | 111008.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
