Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101500 | Not Available | Positive | 483934 - 485148 | 43188.6 |
| crispr-associated protein cas2 | SAMN05421854_101501 | Not Available | Negative | 485030 - 485320 | 10590.7 |
| crisp-associated protein cas1 | SAMN05421854_101502 | Not Available | Negative | 485322 - 486338 | 37182.0 |
| crispr-associated exonuclease cas4 | SAMN05421854_101503 | Not Available | Negative | 486425 - 486970 | 19570.2 |
| crispr-associated protein csd2 | SAMN05421854_101504 | Not Available | Negative | 486976 - 487863 | 32384.2 |
| crispr-associated protein csd1 | SAMN05421854_101505 | Not Available | Negative | 487916 - 489691 | 65127.0 |
| crispr-associated protein cas5d | SAMN05421854_101506 | Not Available | Negative | 489692 - 490354 | 24822.1 |
| crispr-associated endonuclease/helicase cas3 | SAMN05421854_101507 | Not Available | Negative | 491175 - 493388 | 79696.9 |
| hypothetical protein | SAMN05421854_101508 | Not Available | Negative | 493700 - 497545 | 141878.0 |
| hypothetical protein | SAMN05421854_101509 | Not Available | Negative | 497747 - 498301 | 19695.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
