Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101480 | Not Available | Positive | 466272 - 466475 | 7626.95 |
| lsr2 protein | SAMN05421854_101481 | Not Available | Positive | 466638 - 467048 | 15516.2 |
| amidohydrolase family protein | SAMN05421854_101482 | Not Available | Negative | 467191 - 467649 | 16467.0 |
| Trna-lys | Not Available | Not Available | Positive | 467904 - 467976 | Not Available |
| s-adenosyl methyltransferase | SAMN05421854_101484 | Not Available | Negative | 468070 - 468408 | 11902.0 |
| hypothetical protein | SAMN05421854_101485 | Not Available | Positive | 468483 - 468803 | 11856.6 |
| helix-turn-helix domain-containing protein | SAMN05421854_101486 | Not Available | Negative | 468865 - 470058 | 42165.1 |
| hypothetical protein | SAMN05421854_101487 | Not Available | Negative | 470205 - 470951 | 27004.5 |
| rhs repeat-associated core domain-containing protein | SAMN05421854_101488 | Not Available | Negative | 471230 - 474364 | 109013.0 |
| zinc-finger of transposase is204/is1001/is1096/is1165 | SAMN05421854_101489 | Not Available | Negative | 474985 - 475926 | 34845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
