Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_101470 | Not Available | Positive | 455165 - 455818 | 23478.1 |
| lanthionine synthetase c-like protein | SAMN05421854_101471 | Not Available | Positive | 455815 - 458070 | 81023.5 |
| hypothetical protein | SAMN05421854_101472 | Not Available | Positive | 458067 - 458801 | 25271.8 |
| trypsin | SAMN05421854_101473 | Not Available | Positive | 458783 - 459790 | 35278.6 |
| hypothetical protein | SAMN05421854_101474 | Not Available | Positive | 459939 - 460193 | 9123.08 |
| helix-turn-helix domain-containing protein | SAMN05421854_101475 | Not Available | Positive | 460630 - 461865 | 44567.0 |
| hypothetical protein | SAMN05421854_101476 | Not Available | Positive | 462225 - 463118 | 33111.5 |
| hypothetical protein | SAMN05421854_101477 | Not Available | Positive | 463401 - 463796 | 15000.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421854_101478 | Not Available | Positive | 464224 - 465435 | 44347.5 |
| peptidase inhibitor family i36 | SAMN05421854_101479 | Not Available | Negative | 465745 - 466182 | 15139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
