Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_10111 | Not Available | Negative | 10808 - 11101 | 10290.5 |
| anti-sigma-d factor rsda to sigma factor binding region | SAMN05421854_10112 | Not Available | Negative | 11164 - 12102 | 32140.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_10113 | Not Available | Negative | 12103 - 12675 | 20414.5 |
| two component transcriptional regulator, luxr family | SAMN05421854_10114 | Not Available | Negative | 12999 - 13595 | 21257.6 |
| hypothetical protein | SAMN05421854_10115 | Not Available | Negative | 13727 - 14842 | 37179.9 |
| merr hth family regulatory protein | SAMN05421854_10116 | Not Available | Negative | 14852 - 15841 | 35142.3 |
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05421854_10117 | Not Available | Positive | 16005 - 16307 | 11277.5 |
| transcriptional regulator, tetr family | SAMN05421854_10118 | Not Available | Negative | 16314 - 16955 | 23109.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_10119 | Not Available | Positive | 17049 - 17789 | 24907.7 |
| chaperonin groel | SAMN05421854_10120 | Not Available | Negative | 18111 - 19724 | 56342.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
