Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101410 | Not Available | Negative | 398352 - 398846 | 17590.1 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421854_101411 | Not Available | Negative | 399105 - 400067 | 33269.1 |
| dna methylase | SAMN05421854_101412 | Not Available | Negative | 400209 - 401426 | 42958.3 |
| hypothetical protein | SAMN05421854_101413 | Not Available | Negative | 401423 - 402490 | 36340.6 |
| hypothetical protein | SAMN05421854_101414 | Not Available | Positive | 403031 - 404095 | 38043.0 |
| hypothetical protein | SAMN05421854_101415 | Not Available | Positive | 404338 - 404628 | 9947.48 |
| hypothetical protein | SAMN05421854_101416 | Not Available | Positive | 404632 - 407052 | 83169.7 |
| prgi family protein | SAMN05421854_101417 | Not Available | Positive | 407064 - 408353 | 44886.3 |
| aaa-like domain-containing protein | SAMN05421854_101418 | Not Available | Positive | 408359 - 410329 | 69970.0 |
| dna helicase hera, contains has-barrel and atpase domains | SAMN05421854_101419 | Not Available | Positive | 410396 - 412960 | 92310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
