Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05421854_101400 | Not Available | Negative | 387169 - 387585 | 15354.1 |
| helix-turn-helix domain-containing protein | SAMN05421854_101401 | Not Available | Positive | 387822 - 390116 | 82857.8 |
| methyltransferase domain-containing protein | SAMN05421854_101402 | Not Available | Negative | 390223 - 390963 | 26717.6 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421854_101403 | Not Available | Negative | 390960 - 392522 | 56592.8 |
| hypothetical protein | SAMN05421854_101404 | Not Available | Negative | 392600 - 392725 | 4228.88 |
| hypothetical protein | SAMN05421854_101405 | Not Available | Positive | 392937 - 394409 | 53964.2 |
| site-specific recombinase xerd | SAMN05421854_101406 | Not Available | Negative | 394546 - 396024 | 54714.6 |
| dna binding domain-containing protein, excisionase family | SAMN05421854_101407 | Not Available | Negative | 396108 - 397037 | 33848.5 |
| hypothetical protein | SAMN05421854_101408 | Not Available | Negative | 397082 - 397555 | 16943.3 |
| recombinase | SAMN05421854_101409 | Not Available | Negative | 397555 - 397932 | 13805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
