Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase, class iv | SAMN05421854_101390 | Not Available | Positive | 378577 - 379857 | 44967.3 |
| acyl-coa thioester hydrolase | SAMN05421854_101391 | Not Available | Positive | 379854 - 380258 | 15152.1 |
| hypothetical protein | SAMN05421854_101392 | Not Available | Positive | 380381 - 380890 | 17253.7 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421854_101393 | Not Available | Negative | 380877 - 381632 | 27696.9 |
| epoxide hydrolase n terminus | SAMN05421854_101394 | Not Available | Positive | 381901 - 382455 | 20562.4 |
| hypothetical protein | SAMN05421854_101395 | Not Available | Negative | 383162 - 383461 | 11884.9 |
| imidazolonepropionase | SAMN05421854_101396 | Not Available | Negative | 383779 - 384954 | 40741.2 |
| hypothetical protein | SAMN05421854_101397 | Not Available | Negative | 384972 - 385418 | 16484.7 |
| hypothetical protein | SAMN05421854_101398 | Not Available | Negative | 385415 - 386539 | 40886.2 |
| protein of unknown function | SAMN05421854_101399 | Not Available | Negative | 386536 - 386982 | 16477.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
