Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 359874 - 359950 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 359965 - 360037 | Not Available |
| hypothetical protein | SAMN05421854_101372 | Not Available | Negative | 360418 - 360669 | 8604.02 |
| hypothetical protein | SAMN05421854_101373 | Not Available | Positive | 361060 - 361539 | 17720.8 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421854_101374 | Not Available | Negative | 362269 - 362472 | 7461.7 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421854_101375 | Not Available | Positive | 362931 - 364139 | 42340.6 |
| hypothetical protein | SAMN05421854_101376 | Not Available | Positive | 364302 - 364601 | 9631.58 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421854_101377 | Not Available | Positive | 364609 - 365154 | 20340.2 |
| hypothetical protein | SAMN05421854_101378 | Not Available | Positive | 365160 - 365660 | 16494.5 |
| hypothetical protein | SAMN05421854_101379 | Not Available | Positive | 365827 - 365946 | 4069.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
