Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 3604 - 5127 | 18.01 |
| maleylpyruvate isomerase | SAMN05421854_1013 | Not Available | Negative | 3012 - 3701 | 24146.5 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 4232 - 4321 | 18.01 |
| cholesterol oxidase | SAMN05421854_1014 | Not Available | Negative | 3716 - 5422 | 61458.0 |
| hypothetical protein | SAMN05421854_1015 | Not Available | Negative | 5483 - 5689 | 7545.51 |
| imp dehydrogenase | SAMN05421854_1016 | Not Available | Negative | 5790 - 6968 | 41324.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_1017 | Not Available | Positive | 7101 - 8336 | 43625.9 |
| protein of unknown function | SAMN05421854_1018 | Not Available | Negative | 8288 - 8413 | 4868.53 |
| imp dehydrogenase | SAMN05421854_1019 | Not Available | Negative | 8646 - 10157 | 52267.2 |
| hypothetical protein | SAMN05421854_10110 | Not Available | Positive | 10297 - 10692 | 14614.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
