Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN05421854_101350 | Not Available | Negative | 341427 - 342149 | 25356.1 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05421854_101351 | Not Available | Negative | 342211 - 343383 | 42632.8 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05421854_101352 | Not Available | Negative | 343397 - 344620 | 42777.9 |
| erythromycin esterase homolog | SAMN05421854_101353 | Not Available | Negative | 344688 - 345767 | 38884.7 |
| dna-binding transcriptional regulator, merr family | SAMN05421854_101354 | Not Available | Positive | 345857 - 346528 | 24743.4 |
| nipsnap protein | SAMN05421854_101355 | Not Available | Negative | 346529 - 346837 | 11851.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN05421854_101356 | Not Available | Negative | 346834 - 347964 | 41747.2 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05421854_101357 | Not Available | Positive | 348030 - 349370 | 45980.5 |
| transcriptional repressor c-terminal | SAMN05421854_101358 | Not Available | Negative | 349327 - 349896 | 20029.2 |
| hypothetical protein | SAMN05421854_101359 | Not Available | Positive | 349987 - 350427 | 15977.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
