Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_101340 | Not Available | Positive | 332007 - 332819 | 30422.9 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421854_101341 | Not Available | Negative | 332778 - 334217 | 50266.9 |
| protein of unknown function | SAMN05421854_101342 | Not Available | Negative | 334387 - 334647 | 9159.59 |
| hypothetical protein | SAMN05421854_101343 | Not Available | Positive | 334921 - 335124 | 6737.97 |
| hypothetical protein | SAMN05421854_101344 | Not Available | Positive | 335129 - 335365 | 9023.92 |
| o-methyltransferase involved in polyketide biosynthesis | SAMN05421854_101345 | Not Available | Negative | 335710 - 336558 | 30953.3 |
| glycosyltransferase, mgt family | SAMN05421854_101346 | Not Available | Positive | 336679 - 337833 | 40907.9 |
| helix-turn-helix domain-containing protein | SAMN05421854_101347 | Not Available | Negative | 337793 - 338647 | 31991.2 |
| cyclase | SAMN05421854_101348 | Not Available | Positive | 338931 - 339848 | 32699.6 |
| 6-phosphogluconate dehydrogenase | SAMN05421854_101349 | Not Available | Positive | 339935 - 341371 | 50877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
