Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN05421854_101330 | Not Available | Negative | 324222 - 324755 | 19308.9 |
| hypothetical protein | SAMN05421854_101331 | Not Available | Negative | 324755 - 324964 | 7734.28 |
| hypothetical protein | SAMN05421854_101332 | Not Available | Positive | 325375 - 326139 | 27175.7 |
| protein of unknown function | SAMN05421854_101333 | Not Available | Positive | 326199 - 326882 | 23919.8 |
| d-cysteine desulfhydrase | SAMN05421854_101334 | Not Available | Negative | 326860 - 327888 | 35808.7 |
| protein of unknown function | SAMN05421854_101335 | Not Available | Negative | 327937 - 328542 | 22866.2 |
| amidase | SAMN05421854_101336 | Not Available | Positive | 328621 - 329997 | 47382.6 |
| transcriptional regulator, tetr family | SAMN05421854_101337 | Not Available | Positive | 329964 - 330542 | 20258.6 |
| uncharacterized conserved protein, duf2236 family | SAMN05421854_101338 | Not Available | Positive | 330526 - 331395 | 33078.9 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN05421854_101339 | Not Available | Negative | 331371 - 331916 | 19436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
