Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmoprotectant transport system permease protein | SAMN05421854_101310 | Not Available | Positive | 305912 - 306604 | 24713.1 |
| osmoprotectant transport system permease protein | SAMN05421854_101311 | Not Available | Positive | 306601 - 307314 | 25679.4 |
| histidine ammonia-lyase | SAMN05421854_101312 | Not Available | Negative | 307331 - 308692 | 48222.1 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05421854_101313 | Not Available | Negative | 308703 - 309248 | 18493.4 |
| protein of unknown function | SAMN05421854_101314 | Not Available | Negative | 309280 - 309573 | 10883.6 |
| heparin binding hemagglutinin hbha | SAMN05421854_101315 | Not Available | Negative | 310501 - 311184 | 24298.5 |
| helix-turn-helix | SAMN05421854_101316 | Not Available | Negative | 311181 - 311606 | 15283.1 |
| methyltransferase, atp-grasp peptide maturase system | SAMN05421854_101317 | Not Available | Positive | 311717 - 312856 | 41586.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421854_101318 | Not Available | Negative | 312857 - 313690 | 29515.2 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421854_101319 | Not Available | Positive | 313813 - 314193 | 14675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
