Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | SAMN05421854_101300 | Not Available | Positive | 298000 - 298872 | 31781.9 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05421854_101301 | Not Available | Negative | 298924 - 299973 | 36552.6 |
| transcriptional regulator, tetr family | SAMN05421854_101302 | Not Available | Positive | 300094 - 300711 | 22303.6 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421854_101303 | Not Available | Negative | 300692 - 301636 | 34405.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421854_101304 | Not Available | Positive | 301699 - 302091 | 12652.4 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421854_101305 | Not Available | Positive | 302088 - 302492 | 14839.5 |
| 2-haloacid dehalogenase | SAMN05421854_101306 | Not Available | Positive | 302547 - 303206 | 23167.8 |
| hypothetical protein | SAMN05421854_101307 | Not Available | Negative | 303196 - 304209 | 35535.8 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421854_101308 | Not Available | Negative | 304323 - 304757 | 15444.2 |
| osmoprotectant transport system substrate-binding protein | SAMN05421854_101309 | Not Available | Negative | 304854 - 305771 | 32348.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
