Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421854_101290 | Not Available | Negative | 288684 - 289508 | 28535.0 |
| putative sensory transduction regulator | SAMN05421854_101291 | Not Available | Negative | 289575 - 290087 | 19055.4 |
| d-inositol-3-phosphate glycosyltransferase | SAMN05421854_101292 | Not Available | Negative | 290084 - 291382 | 46362.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_101293 | Not Available | Negative | 291396 - 292217 | 28075.2 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421854_101294 | Not Available | Negative | 292247 - 293434 | 41837.9 |
| udp-n-acetylmuramate dehydrogenase | SAMN05421854_101295 | Not Available | Negative | 293610 - 294596 | 34268.8 |
| protein of unknown function | SAMN05421854_101296 | Not Available | Positive | 295321 - 295821 | 18078.4 |
| hypothetical protein | SAMN05421854_101297 | Not Available | Positive | 295827 - 296600 | 28199.3 |
| membrane protein deda, snare-associated domain | SAMN05421854_101298 | Not Available | Positive | 296643 - 297467 | 29068.2 |
| tigr03083 family protein | SAMN05421854_101299 | Not Available | Positive | 297406 - 297975 | 20815.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
