Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase-like superfamily protein | SAMN05421854_101280 | Not Available | Negative | 277832 - 278662 | 29342.1 |
| sugar phosphate isomerase/epimerase | SAMN05421854_101281 | Not Available | Negative | 278824 - 279627 | 28854.3 |
| hypothetical protein | SAMN05421854_101282 | Not Available | Negative | 279662 - 281368 | 59899.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421854_101283 | Not Available | Negative | 281517 - 282500 | 34419.2 |
| two-component system, ompr family, response regulator regx3 | SAMN05421854_101284 | Not Available | Negative | 282688 - 283377 | 25195.5 |
| two-component system, ompr family, sensor histidine kinase senx3 | SAMN05421854_101285 | Not Available | Negative | 283374 - 284612 | 43936.5 |
| predicted oxidoreductase | SAMN05421854_101286 | Not Available | Negative | 284763 - 285641 | 31055.6 |
| hypothetical protein | SAMN05421854_101287 | Not Available | Positive | 285717 - 286343 | 23012.6 |
| hypothetical protein | SAMN05421854_101288 | Not Available | Positive | 286340 - 287245 | 31449.9 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN05421854_101289 | Not Available | Negative | 287514 - 288263 | 27290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
