Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_101270 | Not Available | Positive | 269523 - 270233 | 25623.6 |
| hypothetical protein | SAMN05421854_101271 | Not Available | Positive | 270331 - 271419 | 37945.0 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN05421854_101272 | Not Available | Positive | 271575 - 272468 | 31806.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421854_101273 | Not Available | Negative | 272503 - 272910 | 14011.8 |
| dna-binding transcriptional regulator, acrr family | SAMN05421854_101274 | Not Available | Positive | 273004 - 273591 | 21451.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421854_101275 | Not Available | Negative | 273595 - 274623 | 37086.4 |
| udp-glucose 4-epimerase | SAMN05421854_101276 | Not Available | Negative | 274620 - 275666 | 37085.1 |
| protein of unknown function | SAMN05421854_101277 | Not Available | Negative | 275928 - 276029 | 4103.4 |
| dna binding domain-containing protein, excisionase family | SAMN05421854_101278 | Not Available | Negative | 276217 - 276465 | 9087.1 |
| pyrroline-5-carboxylate reductase | SAMN05421854_101279 | Not Available | Negative | 276910 - 277722 | 28367.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
