Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_102474 | Not Available | Negative | 2312707 - 2312823 | 3809.61 |
| hypothetical protein | SAMN05421854_102475 | Not Available | Negative | 2312820 - 2313023 | 7595.06 |
| hypothetical protein | SAMN05421854_102476 | Not Available | Negative | 2313020 - 2313322 | 11717.7 |
| hypothetical protein | SAMN05421854_102477 | Not Available | Negative | 2313367 - 2313651 | 10297.5 |
| Hypothetical protein | SAMN05421854_102478 | Not Available | Negative | 2313648 - 2314148 | 19707.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 90 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 6 - 122 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 207 - 3331 | 18.01 |
| berberine and berberine like | SAMN05421854_1011 | Not Available | Negative | 387 - 1850 | 49363.5 |
| dna-binding transcriptional regulator, acrr family | SAMN05421854_1012 | Not Available | Negative | 1847 - 2491 | 23262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
