Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylinositol alpha 1,6-mannosyltransferase | SAMN05421854_101230 | Not Available | Negative | 230662 - 231780 | 39537.9 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05421854_101231 | Not Available | Positive | 231957 - 232790 | 28705.9 |
| hypothetical protein | SAMN05421854_101232 | Not Available | Negative | 232833 - 233279 | 15903.5 |
| hypothetical protein | SAMN05421854_101233 | Not Available | Negative | 233304 - 233972 | 25439.7 |
| peptidase family m1 | SAMN05421854_101234 | Not Available | Negative | 234031 - 235545 | 54126.8 |
| hypothetical protein | SAMN05421854_101235 | Not Available | Negative | 235637 - 235981 | 12015.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN05421854_101236 | Not Available | Negative | 236014 - 237690 | 59531.3 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN05421854_101237 | Not Available | Positive | 237748 - 238698 | 34948.1 |
| o-succinylbenzoic acid--coa ligase | SAMN05421854_101238 | Not Available | Positive | 238733 - 239872 | 38698.3 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN05421854_101239 | Not Available | Positive | 240014 - 240892 | 30487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
