Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit e | SAMN05421854_101220 | Not Available | Negative | 221652 - 222515 | 30461.6 |
| nadh-quinone oxidoreductase subunit d | SAMN05421854_101221 | Not Available | Negative | 222512 - 223843 | 49247.6 |
| nadh-quinone oxidoreductase subunit c | SAMN05421854_101222 | Not Available | Negative | 223978 - 224739 | 28057.0 |
| nadh-quinone oxidoreductase subunit b | SAMN05421854_101223 | Not Available | Negative | 224746 - 225294 | 19956.6 |
| nadh-quinone oxidoreductase subunit a | SAMN05421854_101224 | Not Available | Negative | 225299 - 225709 | 14672.3 |
| geranylgeranyl reductase family | SAMN05421854_101225 | Not Available | Negative | 226289 - 227581 | 46369.6 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05421854_101226 | Not Available | Negative | 227647 - 228336 | 25048.3 |
| hypothetical protein | SAMN05421854_101227 | Not Available | Negative | 228347 - 229003 | 21708.9 |
| dna-binding transcriptional regulator, marr family | SAMN05421854_101228 | Not Available | Positive | 229085 - 229543 | 16510.8 |
| alpha-1,6-mannosyltransferase | SAMN05421854_101229 | Not Available | Negative | 229555 - 230658 | 39098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
