Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | SAMN05421854_101200 | Not Available | Negative | 197767 - 198399 | 23594.9 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN05421854_101201 | Not Available | Negative | 198578 - 199039 | 17142.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_101202 | Not Available | Positive | 199136 - 199996 | 31697.2 |
| n-dimethylarginine dimethylaminohydrolase | SAMN05421854_101203 | Not Available | Negative | 200115 - 200945 | 30584.3 |
| dna-binding transcriptional regulator, lrp family | SAMN05421854_101204 | Not Available | Positive | 201035 - 201478 | 15887.2 |
| enoyl-coa hydratase | SAMN05421854_101205 | Not Available | Positive | 201535 - 202296 | 25873.1 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN05421854_101206 | Not Available | Positive | 202583 - 204511 | 68581.6 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN05421854_101207 | Not Available | Positive | 204508 - 205572 | 38323.6 |
| hypothetical protein | SAMN05421854_101208 | Not Available | Negative | 205920 - 207344 | 51032.0 |
| heptaprenyl diphosphate synthase | SAMN05421854_101209 | Not Available | Negative | 207357 - 208400 | 36908.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
