Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101190 | Not Available | Negative | 182399 - 183607 | 42216.7 |
| right handed beta helix region | SAMN05421854_101191 | Not Available | Negative | 183609 - 185114 | 53434.2 |
| heparinase ii/iii n-terminus | SAMN05421854_101192 | Not Available | Negative | 185132 - 187012 | 69185.2 |
| predicted dehydrogenase | SAMN05421854_101193 | Not Available | Negative | 187012 - 189177 | 77043.9 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421854_101194 | Not Available | Negative | 189174 - 191078 | 70511.2 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN05421854_101195 | Not Available | Negative | 191093 - 192673 | 55380.6 |
| chain length determinant protein | SAMN05421854_101196 | Not Available | Negative | 192670 - 194013 | 46596.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421854_101197 | Not Available | Negative | 194121 - 195335 | 45074.2 |
| gdp-mannose 6-dehydrogenase | SAMN05421854_101198 | Not Available | Negative | 195325 - 196659 | 47006.8 |
| chitosanase of glycosyl hydrolase group 75 | SAMN05421854_101199 | Not Available | Negative | 196880 - 197566 | 23380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
