Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421854_101180 | Not Available | Positive | 169312 - 170640 | 45944.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421854_101181 | Not Available | Positive | 170637 - 171590 | 35842.3 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN05421854_101182 | Not Available | Positive | 171587 - 172768 | 43123.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05421854_101183 | Not Available | Positive | 172765 - 173304 | 19247.5 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05421854_101184 | Not Available | Positive | 173311 - 174621 | 46594.6 |
| predicted atpase | SAMN05421854_101185 | Not Available | Negative | 174593 - 177775 | 111761.0 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421854_101186 | Not Available | Positive | 177894 - 179375 | 52926.7 |
| lysophospholipase l1 | SAMN05421854_101187 | Not Available | Positive | 179398 - 180558 | 41110.3 |
| undecaprenyl-diphosphatase | SAMN05421854_101188 | Not Available | Negative | 180586 - 181236 | 22363.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421854_101189 | Not Available | Negative | 181233 - 182402 | 42063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
