Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-to-tail stopper | SAMN05421854_102464 | Not Available | Negative | 2303952 - 2304353 | 14247.0 |
| Head-to-tail connector complex protein | SAMN05421854_102465 | Not Available | Negative | 2304350 - 2304928 | 20561.4 |
| hypothetical protein | SAMN05421854_102466 | Not Available | Negative | 2304948 - 2305316 | 13403.3 |
| Capsid protein | SAMN05421854_102467 | Not Available | Negative | 2305324 - 2306517 | 42103.5 |
| Major capsid protein | SAMN05421854_102468 | Not Available | Negative | 2306562 - 2307278 | 24651.2 |
| Capsid maturation protease | SAMN05421854_102469 | Not Available | Negative | 2307333 - 2308241 | 32376.7 |
| Portal protein | SAMN05421854_102470 | Not Available | Negative | 2308225 - 2309718 | 55208.9 |
| Gp22 | SAMN05421854_102471 | Not Available | Negative | 2309715 - 2311328 | 59914.6 |
| Gp21 | SAMN05421854_102472 | Not Available | Negative | 2311312 - 2311785 | 17429.7 |
| Trna,type:thr,anti_codon:ggt; | Not Available | Not Available | Positive | 2312511 - 2312616 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
