Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l33 | SAMN05421854_101150 | Not Available | Negative | 139733 - 139897 | 6442.81 |
| Trna-met | Not Available | Not Available | Positive | 139947 - 140019 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 140169 - 140241 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421854_101153 | Not Available | Negative | 140321 - 142942 | 94536.1 |
| ribosomal protein s18 acetylase rimi | SAMN05421854_101154 | Not Available | Positive | 143192 - 144133 | 33621.1 |
| s-adenosyl methyltransferase | SAMN05421854_101155 | Not Available | Positive | 144168 - 145016 | 31513.2 |
| s-adenosyl methyltransferase | SAMN05421854_101156 | Not Available | Positive | 145013 - 145840 | 30710.1 |
| atp-dependent lon protease | SAMN05421854_101157 | Not Available | Positive | 145973 - 148375 | 85420.0 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421854_101158 | Not Available | Negative | 148930 - 149811 | 31795.0 |
| hypothetical protein | SAMN05421854_101159 | Not Available | Negative | 149886 - 151034 | 41808.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
