Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05421854_101140 | Not Available | Negative | 132490 - 133299 | 28099.5 |
| large subunit ribosomal protein l1 | SAMN05421854_101141 | Not Available | Negative | 133369 - 134088 | 25602.1 |
| lsu ribosomal protein l11p | SAMN05421854_101142 | Not Available | Negative | 134163 - 134597 | 15340.7 |
| transcription antitermination protein nusg | SAMN05421854_101143 | Not Available | Negative | 134680 - 135501 | 29108.5 |
| preprotein translocase subunit sece | SAMN05421854_101144 | Not Available | Negative | 135578 - 136012 | 15630.8 |
| Trna-trp | Not Available | Not Available | Positive | 136045 - 136117 | Not Available |
| probable f420-dependent oxidoreductase, rv2161c family | SAMN05421854_101146 | Not Available | Positive | 136552 - 137454 | 32172.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05421854_101147 | Not Available | Positive | 137535 - 138413 | 29642.6 |
| maoc like domain-containing protein | SAMN05421854_101148 | Not Available | Negative | 138762 - 139160 | 14348.4 |
| acyl dehydratase | SAMN05421854_101149 | Not Available | Negative | 139157 - 139606 | 16374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
