Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor mce family protein | SAMN05421854_101130 | Not Available | Negative | 122386 - 123567 | 41268.4 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421854_101131 | Not Available | Negative | 123564 - 124550 | 35246.1 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421854_101132 | Not Available | Negative | 124547 - 125575 | 36687.1 |
| virulence factor mce family protein | SAMN05421854_101133 | Not Available | Negative | 125572 - 126903 | 46926.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421854_101134 | Not Available | Negative | 126900 - 127736 | 29639.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421854_101135 | Not Available | Negative | 127739 - 128527 | 27417.1 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421854_101136 | Not Available | Negative | 128524 - 129702 | 42758.7 |
| large subunit ribosomal protein l7/l12 | SAMN05421854_101137 | Not Available | Negative | 130158 - 130544 | 13366.0 |
| lsu ribosomal protein l10p | SAMN05421854_101138 | Not Available | Negative | 130593 - 131147 | 19183.7 |
| hypothetical protein | SAMN05421854_101139 | Not Available | Positive | 131466 - 132485 | 36063.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
