Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m1 | SAMN05421854_1011585 | Not Available | Negative | 1584520 - 1585941 | 51561.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_1011586 | Not Available | Positive | 1585999 - 1586748 | 27477.3 |
| putative peptidoglycan binding domain-containing protein | SAMN05421854_1011587 | Not Available | Negative | 1586832 - 1587788 | 34054.0 |
| a/g-specific dna-adenine glycosylase | SAMN05421854_1011588 | Not Available | Negative | 1587879 - 1588754 | 31413.6 |
| carbonic anhydrase | SAMN05421854_1011589 | Not Available | Negative | 1588778 - 1589269 | 18189.8 |
| transcriptional regulator, laci family | SAMN05421854_1011590 | Not Available | Negative | 1589389 - 1590642 | 44838.6 |
| zinc/manganese transport system substrate-binding protein | SAMN05421854_1011591 | Not Available | Positive | 1590668 - 1591582 | 31167.3 |
| zinc/manganese transport system atp-binding protein | SAMN05421854_1011592 | Not Available | Positive | 1591582 - 1592418 | 29629.7 |
| zinc/manganese transport system permease protein | SAMN05421854_1011593 | Not Available | Positive | 1592431 - 1593306 | 29779.4 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421854_1011594 | Not Available | Positive | 1593739 - 1594281 | 19419.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
