Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421854_1011565 | Not Available | Negative | 1563042 - 1563869 | 30380.4 |
| tigr03086 family protein | SAMN05421854_1011566 | Not Available | Positive | 1563937 - 1564506 | 19483.0 |
| ferric iron reductase protein fhuf, involved in iron transport | SAMN05421854_1011567 | Not Available | Negative | 1564525 - 1565340 | 30370.0 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05421854_1011568 | Not Available | Positive | 1565706 - 1568255 | 94511.9 |
| hypothetical protein | SAMN05421854_1011569 | Not Available | Positive | 1568319 - 1569305 | 36355.9 |
| hypothetical protein | SAMN05421854_1011570 | Not Available | Negative | 1569245 - 1569493 | 8734.22 |
| hsp70 protein | SAMN05421854_1011571 | Not Available | Positive | 1569593 - 1571365 | 62395.7 |
| pyroglutamyl-peptidase | SAMN05421854_1011572 | Not Available | Negative | 1571369 - 1571974 | 20734.8 |
| peptidase family m1 | SAMN05421854_1011573 | Not Available | Negative | 1571971 - 1573419 | 52764.6 |
| predicted atpase | SAMN05421854_1011574 | Not Available | Positive | 1573545 - 1576736 | 116166.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
